SNP Profiles of MO 20   View Data

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 Key

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_Input profile
CCCCGGACGGCCCCGGGGCCTTX_XX_XX_X
1._RUQ_1566
___AC_CCCC____X_XX_XX_X
2._MO_20
_CCGGAAGGCC____TTX_XX_XX_X
3._MO_20
_CCAGACGTCC____TTX_XX_XX_X
4._MO_20
_CCAGACGTCC____TTX_XX_XX_X
5._MO_20
_CCAGACGTCC____TTX_XX_XX_X
6._MO_20
_CCAGACGTCC____TTX_XX_XX_X
7._MO_20
_CCAGACGTCC____TTX_XX_XX_X
8._MO_20
_CCAGACGTCC____TTX_XX_XX_X
9._MO_20
_CCAGACGTCC____TTX_XX_XX_X
10._MO_20
_CCAGACGTCC____TTX_XX_XX_X
11._MO_20
_CCAGACGTCC____TTX_XX_XX_X
12._MO_20
_CCAGACGTCC____TTX_XX_XX_X
13._MO_20
_CCAGACGTCC____TTX_XX_XX_X
14._GC-01-121-6-18
CCCCAGACGTCCCCGTAG_TTX_XX_XX_X
15._GC-01-121-6-18
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
16._GC-01-121-6-18
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
17._GC-01-121-6-18
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
18._GC-01-121-6-18
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
19._GC-01-121-6-18
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
20._GC-08-167-4-10
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
21._GC-08-167-4-10
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
22._GC-08-167-4-10
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
23._GC-08-167-4-10
CCCCAGACGTCCCCGTAGCTTTX_XX_XX_X
24._GC-01-121-6-18
CCCCAGAAGGACAAGGGGCCCCX_XX_XX_X
25._MO_20
_CCAGAAGGAC____CCX_XX_XX_X
26._RUQ_1566
_GG___CC__AGCT_X_XX_XX_X
27._RUQ_1566
CCGG_ACACCCCCACAGAGAAX_XX_XX_X
28._MITC-000675
CCGG_ACACCCCCACAGAGAAX_XX_XX_X
29._MO_20_Fld#_171_Plt#_1
CCGG_ACACCCCCACAGAGAAX_XX_XX_X
30._MO_20_Fld#_74_Plt#_1
CCGG_CCAACCCCCCAGAGAGX_XX_XX_X

Input profile: MO_20 RUQ_1566

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._MO_20 RUQ_1566

identical
3 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._MO_20

91.7 %
6 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 809
 Dapeng Zhang, 2016

3._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 11
 Dapeng Zhang, 2016

4._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 1 > FP
 Dapeng Zhang, 2016

5._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 10 > F
 Dapeng Zhang, 2016

6._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 2 > FP
 Dapeng Zhang, 2016

7._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 4 > FP
 Dapeng Zhang, 2016

8._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8410 1
 Dapeng Zhang, 2016

9._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8410 2
 Dapeng Zhang, 2016

10._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8410 3
 Dapeng Zhang, 2016

11._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8410 4
 Dapeng Zhang, 2016

12._MO_20

83.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

13._MO_20

83.3 %
6 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B D238 T2
 Dapeng Zhang, 2016

14._MO_20 GC-01-121-6-18

80 %
10 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

15._MO_20 GC-01-121-6-18

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

16._MO_20 GC-01-121-6-18

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

17._MO_20 GC-01-121-6-18

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP4
 Mars, 2018

18._MO_20 GC-01-121-6-18

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

19._MO_20 GC-01-121-6-18

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

20._MO_20 GC-08-167-4-10

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

21._MO_20 GC-08-167-4-10

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._MO_20 GC-08-167-4-10

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

23._MO_20 GC-08-167-4-10

77.3 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

24._MO_20 GC-01-121-6-18

68.2 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

25._MO_20

58.3 %
6 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1618 13
 Dapeng Zhang, 2016
Population Assignment: 
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 Dapeng Zhang, 2016

26._MO_20 RUQ_1566

50 %
4 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

27._MO_20 RUQ_1566

45 %
10 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

28._MO_20 MITC-000675

45 %
10 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

29._MO_20 MO_20_Fld#_171_Plt#_1

45 %
10 shared markers

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USDA-TARS, United States of America
Location: Field: 171, Tree: 1
 Mars, 2018

30._MO_20 MO_20_Fld#_74_Plt#_1

40 %
10 shared markers

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USDA-TARS, United States of America
Location: Field: 74, Tree: 1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP90 2TcSNP226 3TcSNP469 4TcSNP529 5TcSNP560
6TcSNP591 7TcSNP823 8TcSNP1063 9TcSNP1111 10TcSNP1439
11TcSNP1442